STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114452280ATP-citrate synthase-like. (1121 aa)    
Predicted Functional Partners:
suclg1
succinate-CoA ligase alpha subunit.
  
0.998
cs
Citrate synthase.
  
 0.996
sdha
Succinate dehydrogenase complex flavoprotein subunit A.
  
 0.989
dlat
Dihydrolipoamide S-acetyltransferase.
  
 0.982
pdhx
Pyruvate dehydrogenase complex component X.
  
 0.981
sdhc
Succinate dehydrogenase complex subunit C.
  
 
 0.981
fasn
Fatty acid synthase.
   
 0.977
LOC114453409
Highly reducing polyketide synthase sorA-like.
   
 0.973
LOC114453491
Highly reducing polyketide synthase 40-like.
   
 0.973
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
  
 0.965
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.