STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114447634Toll-like receptor 1. (829 aa)    
Predicted Functional Partners:
myd88
MYD88 innate immune signal transduction adaptor.
   
 0.925
tirap
TIR domain containing adaptor protein.
   
 0.909
tollip
Toll interacting protein.
    
 0.879
nfkb1
Nuclear factor kappa B subunit 1.
   
 0.784
hspa9
Heat shock protein family A (Hsp70) member 9.
    
  0.781
ENSPRNP00000031711
annotation not available
     
0.771
LOC114442407
Toll-like receptor 1.
     
0.771
LOC114441022
Rho-related BTB domain-containing protein 2-like.
    
  0.762
dcn
Decorin.
    
 0.762
ENSPRNP00000003159
Rac family small GTPase 2.
   
 0.745
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.