STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005097annotation not available (1384 aa)    
Predicted Functional Partners:
pcgf1
Polycomb group ring finger 1.
    
 0.885
pcgf6
Polycomb group ring finger 6.
    
 0.885
RING1
Ring finger protein 1.
    
 0.835
rnf2
Ring finger protein 2.
    
 0.835
skp1
S-phase kinase associated protein 1.
   
 0.814
anapc4
Anaphase promoting complex subunit 4.
    
  0.803
cdc27
Cell division cycle 27.
   
  0.801
brca1
BRCA1 DNA repair associated.
    
 0.800
brcc3
BRCA1/BRCA2-containing complex subunit 3.
    
  0.796
babam2
BRISC and BRCA1 A complex member 2.
   
  0.796
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.