STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cunh19orf25Chromosome unknown C19orf25 homolog. (107 aa)    
Predicted Functional Partners:
rint1
RAD50 interactor 1.
    
 
 0.740
scfd2
Sec1 family domain containing 2.
    
   0.618
use1
Unconventional SNARE in the ER 1.
    
   0.543
cbr4
Carbonyl reductase 4.
    
 
 0.529
zw10
Zw10 kinetochore protein.
    
 
 0.472
baiap2
BAR/IMD domain containing adaptor protein 2.
    
   0.416
LOC114439443
Brain-specific angiogenesis inhibitor 1-associated protein 2-like.
    
   0.416
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.