STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432212Multidrug and toxin extrusion protein 1-like. (571 aa)    
Predicted Functional Partners:
hsd17b10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.899
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.777
pop1
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.729
pop5
POP5 homolog, ribonuclease P/MRP subunit.
     
 0.725
rpp30
Ribonuclease P/MRP subunit p30.
   
 
 0.683
ENSPRNP00000005020
tRNA methyltransferase 10A.
   
 0.675
trmt10b
tRNA methyltransferase 10B.
   
 0.675
ENSPRNP00000012746
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.675
LOC114434157
Ribonuclease P protein subunit p21-like.
    
 0.675
pop4
POP4 homolog, ribonuclease P/MRP subunit.
     
 0.672
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.