STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114446691Trafficking kinesin-binding protein 1-like. (695 aa)    
Predicted Functional Partners:
dctn5
Dynactin subunit 5.
    
  0.847
actr10
Actin related protein 10.
     
 0.842
gabrd
Gamma-aminobutyric acid type A receptor delta subunit.
    
 0.832
dctn1
Dynactin subunit 1.
    
 0.817
LOC114450838
Dynactin subunit 1-like.
    
 0.817
dctn3
Dynactin subunit 3.
     
 0.813
LOC114444112
Beta-centractin.
     
 0.801
ENSPRNP00000006545
annotation not available
    
 0.739
LOC114447237
Cilia- and flagella-associated protein 70-like.
    
 0.739
LOC114440721
Mitochondrial Rho GTPase 1-A-like.
    
 0.739
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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