STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nprl3NPR3 like, GATOR1 complex subunit. (587 aa)    
Predicted Functional Partners:
wdr59
WD repeat domain 59.
    
 0.999
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.999
wdr24
WD repeat domain 24.
    
 0.999
LOC114445964
Ras-related GTP-binding protein A.
    
 0.997
mios
Meiosis regulator for oocyte development.
    
 0.997
seh1l
SEH1 like nucleoporin.
    
 0.996
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.992
kptn
Kaptin, actin binding protein.
    
 0.992
lamp1
Lysosomal associated membrane protein 1.
    
 
 0.961
LOC114446764
Ras-related GTP-binding protein C-like.
    
 0.947
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.