STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005267annotation not available (170 aa)    
Predicted Functional Partners:
LOC114437119
Probable endonuclease 4.
   
 0.847
ENSPRNP00000056581
annotation not available
   
 0.794
nthl1
Nth like DNA glycosylase 1.
  
 0.767
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.759
pcna
Proliferating cell nuclear antigen.
  
 0.747
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.745
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.723
ogg1
8-oxoguanine DNA glycosylase.
  
 0.718
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.718
ENSPRNP00000018204
Organic solute carrier partner 1a.
   
 0.716
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.