STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005307annotation not available (492 aa)    
Predicted Functional Partners:
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.750
hspbp1
HSPA (Hsp70) binding protein 1.
   
 0.667
sil1
SIL1 nucleotide exchange factor.
   
 0.667
rpl10
Ribosomal protein L10.
   
 0.667
LOC114441816
Phosphatidate cytidylyltransferase 2-like.
   
 
  0.481
LOC114440742
Phosphatidate cytidylyltransferase 2-like.
   
 
  0.481
mrps14
Mitochondrial ribosomal protein S14.
    
 0.445
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.439
mrps12
Mitochondrial ribosomal protein S12.
    
 0.437
mrps5
Mitochondrial ribosomal protein S5.
    
  0.429
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.