STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438116Sodium-coupled neutral amino acid transporter 3-like. (477 aa)    
Predicted Functional Partners:
LOC114445964
Ras-related GTP-binding protein A.
   
 0.769
ENSPRNP00000019594
Transient receptor potential cation channel, subfamily M, member 2.
     
 0.765
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.759
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.751
lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.748
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.742
LOC114449979
V-type proton ATPase subunit d 1-like.
    
 0.673
LOC114433014
Paired amphipathic helix protein Sin3a-like.
    
 0.656
sin3b
SIN3 transcription regulator family member B.
    
 0.656
sin3a
SIN3 transcription regulator family member A.
    
 0.656
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.