STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005350annotation not available (157 aa)    
Predicted Functional Partners:
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.654
pla2g4a
Phospholipase A2 group IVA.
    
 0.631
SLC39A3
Solute carrier family 39 member 3.
    
 0.623
SLC39A1
Solute carrier family 39 member 1.
    
 0.623
LOC114433967
Zinc transporter ZIP1-like.
    
 0.623
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
  0.607
rps27a
Ribosomal protein S27a.
   
  0.603
becn1
Beclin 1.
    
 0.595
chek2
Checkpoint kinase 2.
    
 0.586
pidd1
P53-induced death domain protein 1.
    
  0.583
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.