STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005374DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae). (214 aa)    
Predicted Functional Partners:
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
 0.841
ube2m
Ubiquitin conjugating enzyme E2 M.
    
 0.841
rbx1
Ring-box 1.
   
 0.797
LOC114452843
Cullin-1.
   
 0.796
LOC114452841
Cullin-1.
   
 0.796
cul2
Cullin 2.
   
 0.785
LOC114450811
NEDD8-like.
    
 0.752
LOC114449449
NEDD8.
    
 0.752
rnf7
Ring finger protein 7.
    
 0.751
LOC114447105
Cullin-3-like.
   
 0.745
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.