STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bloc1s5Biogenesis of lysosomal organelles complex 1 subunit 5. (154 aa)    
Predicted Functional Partners:
bloc1s6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.989
bloc1s1
Biogenesis of lysosomal organelles complex 1 subunit 1.
   
 0.987
bloc1s3
Biogenesis of lysosomal organelles complex 1 subunit 3.
    
 0.985
bloc1s2
Biogenesis of lysosomal organelles complex 1 subunit 2.
    
 0.981
bloc1s4
Biogenesis of lysosomal organelles complex 1 subunit 4.
    
 0.975
snapin
SNAP associated protein.
   
 0.973
LOC114448970
dysbindin-A-like.
    
 0.966
dtnbp1
Dystrobrevin binding protein 1.
    
 0.966
hps3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
     
 0.963
hps5
HPS5 biogenesis of lysosomal organelles complex 2 subunit 2.
     
 0.952
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.