STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bag6BCL2 associated athanogene 6. (1187 aa)    
Predicted Functional Partners:
get4
Guided entry of tail-anchored proteins factor 4.
    
 0.991
LOC114441097
Ubiquitin-like protein 4A.
    
 0.985
sgta
Small glutamine rich tetratricopeptide repeat containing alpha.
   
 0.934
ubxn1
UBX domain protein 1.
    
 
 0.920
sgtb
Small glutamine rich tetratricopeptide repeat containing beta.
   
 0.914
faf2
Fas associated factor family member 2.
    
 
 0.913
RNF126
Ring finger protein 126.
    
 
 0.886
LOC114450224
E3 ubiquitin-protein ligase RNF126-like.
    
 
 0.886
ttc33
Tetratricopeptide repeat domain 33.
   
 0.859
LOC114439406
Desumoylating isopeptidase 1-like.
    
   0.853
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.