STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114432039SH3 domain-containing YSC84-like protein 1. (305 aa)    
Predicted Functional Partners:
mvk
Mevalonate kinase.
    
   0.853
LOC114446145
Neural Wiskott-Aldrich syndrome protein-like.
    
 
 0.771
LOC114452659
Neural Wiskott-Aldrich syndrome protein-like.
    
 
 0.771
was
WASP actin nucleation promoting factor.
    
 
 0.771
ENSPRNP00000028551
SH3 domain containing 19.
   
   0.758
LOC114450854
Shootin-1-like.
    
 
 0.749
ENSPRNP00000056929
annotation not available
    
 
 0.749
trappc8
Trafficking protein particle complex 8.
    
  0.603
LOC114441441
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1.
   
    0.548
LOC114442767
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like.
   
    0.548
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.