STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHDRBS3KH RNA binding domain containing, signal transduction associated 3. (336 aa)    
Predicted Functional Partners:
med4
Mediator complex subunit 4.
   
   0.632
ENSPRNP00000008764
annotation not available
    
   0.627
med14
Mediator complex subunit 14.
    
   0.627
med23
Mediator complex subunit 23.
    
   0.627
med10
Mediator complex subunit 10.
    
   0.627
med17
Mediator complex subunit 17.
    
   0.627
med29
Mediator complex subunit 29.
    
   0.627
med15
Mediator complex subunit 15.
   
   0.627
rasa1
RAS p21 protein activator 1.
    
 
 0.624
grb2
Growth factor receptor bound protein 2.
    
 
 0.621
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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