STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbfox1RNA binding fox-1 homolog 1. (362 aa)    
Predicted Functional Partners:
LOC114448605
RNA-binding protein 24-like.
  
 
 0.792
LOC114429370
RNA-binding protein 24.
  
 
 0.791
LOC114436077
RNA-binding protein 38-like.
  
 
 0.765
LOC114438666
RNA-binding protein 38-like.
  
 
 0.765
LOC114450761
RNA-binding protein with multiple splicing-like.
   
 
 0.699
LOC114442466
Heterogeneous nuclear ribonucleoprotein A0-like.
  
 
 0.685
cirbp
Cold inducible RNA binding protein.
  
 
 0.678
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
  
 
 0.670
LOC114437549
Protein quaking-B-like.
   
 
 0.669
gpatch8
G-patch domain containing 8.
    
 0.666
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.