STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005754annotation not available (145 aa)    
Predicted Functional Partners:
rps3a
Ribosomal protein S3A.
   
  0.792
ENSPRNP00000020677
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
 0.778
mcts1
MCTS1 re-initiation and release factor.
     
 0.774
rps11
Ribosomal protein S11.
    
  0.754
ENSPRNP00000029857
Nuclear FMR1 interacting protein 2.
   
 
 0.754
rps9
Ribosomal protein S9.
     
 0.753
rps3
Ribosomal protein S3.
     
 0.749
rps16
Ribosomal protein S16.
    
  0.741
RPS20
Ribosomal protein S20.
    
  0.726
LOC114427051
La-related protein 1B-like.
   
 0.717
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.