STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 member 3. (344 aa)    
Predicted Functional Partners:
samm50
SAMM50 sorting and assembly machinery component.
    
 0.917
LOC114452018
Sorting and assembly machinery component 50 homolog A.
    
 0.917
mtx3
Metaxin 3.
    
 0.912
LOC114431340
Metaxin-1-like.
    
 0.912
TOMM7
Translocase of outer mitochondrial membrane 7.
    
 0.898
tomm22
Translocase of outer mitochondrial membrane 22.
    
 0.891
tomm70
Translocase of outer mitochondrial membrane 70.
    
 0.834
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
 0.769
ankzf1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 
  0.763
LOC114433585
Casein kinase II subunit alpha'-like.
    
 0.743
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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