STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114441324Transcription factor BTF3-like. (160 aa)    
Predicted Functional Partners:
naca
Nascent polypeptide associated complex subunit alpha.
   
 0.996
LOC114448509
Microtubule-associated protein futsch-like.
   
 0.991
rpl6
Ribosomal protein L6.
   
 0.981
rpl8
Ribosomal protein L8.
   
  0.979
RPL32
Ribosomal protein L32.
   
  0.977
rpl18
Ribosomal protein L18.
   
  0.975
rpl30
Ribosomal protein L30.
   
  0.971
rpl31
Ribosomal protein L31.
   
 0.969
rpl29
Ribosomal protein L29.
   
  0.963
eif3h
Eukaryotic translation initiation factor 3 subunit H.
   
 
  0.961
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.