STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tp53inp1Tumor protein p53 inducible nuclear protein 1. (284 aa)    
Predicted Functional Partners:
LOC114447955
Gamma-aminobutyric acid receptor-associated protein-like 1.
    
 0.881
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.872
gabarap
GABA type A receptor-associated protein.
    
 0.872
LOC114451843
Gamma-aminobutyric acid receptor-associated protein-like 2.
    
 0.872
LOC114444460
Vacuole membrane protein 1-like.
     
 0.847
VMP1
Vacuole membrane protein 1.
     
 0.847
map1lc3a
Microtubule associated protein 1 light chain 3 alpha.
    
 0.714
map1lc3b
Microtubule associated protein 1 light chain 3 beta.
    
 0.714
LOC114442650
Microtubule-associated proteins 1A/1B light chain 3C-like.
    
 0.697
tp73
Tumor protein p73.
    
 0.656
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.