STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000005946Potassium channel tetramerisation domain containing 12.1. (284 aa)    
Predicted Functional Partners:
commd1
Copper metabolism domain containing 1.
     
 0.575
LOC114447105
Cullin-3-like.
    
 0.548
LOC114434621
Cullin-3-like.
    
 0.548
LOC114444719
Cullin-3.
    
 0.548
LOC114449256
Cullin-3-like.
    
 0.548
CUL3
Cullin-3-like.
    
 0.548
ube2f
Ubiquitin conjugating enzyme E2 F (putative).
    
  0.542
ube2m
Ubiquitin conjugating enzyme E2 M.
    
  0.542
tfap2d
Transcription factor AP-2 delta.
   
 0.541
tfap2a
Transcription factor AP-2 alpha.
   
 0.531
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.