STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sall2Spalt like transcription factor 2. (1167 aa)    
Predicted Functional Partners:
bsx
Brain specific homeobox.
   
 0.667
LOC114431572
Histone-binding protein RBBP4-like.
    
  0.622
wdr73
WD repeat domain 73.
    
  0.622
ENSPRNP00000016432
annotation not available
    
  0.622
LOC114433964
Histone-binding protein RBBP7.
    
  0.622
LOC114427249
Histone-binding protein RBBP4.
    
  0.622
mta1
Metastasis associated 1.
    
  0.596
mta2
Metastasis associated 1 family member 2.
    
  0.596
mta3
Metastasis associated 1 family member 3.
    
  0.596
gatad2b
GATA zinc finger domain containing 2B.
    
  0.593
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.