STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006030annotation not available (278 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.837
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.809
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.795
rps27a
Ribosomal protein S27a.
   
 0.759
ddx18
DEAD-box helicase 18.
    
  0.716
atg7
Autophagy related 7.
    
 0.655
trrap
Transformation/transcription domain associated protein.
   
 
 0.619
zfand4
Zinc finger AN1-type containing 4.
   
 0.606
LOC114450866
Polyubiquitin 9-like.
   
 0.603
ENSPRNP00000007295
annotation not available
   
 0.603
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.