STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114450023Rho GTPase-activating protein 1-like. (217 aa)    
Predicted Functional Partners:
LOC114435353
Cell division control protein 42 homolog.
  
 
 0.897
CDC42
Cell division control protein 42 homolog.
  
 
 0.897
LOC114447950
Cell division control protein 42 homolog.
  
 
 0.857
LOC114450059
Cell division control protein 42 homolog.
  
 
 0.857
LOC114439217
Rho-related GTP-binding protein RhoA-C-like.
    
 0.769
LOC114437949
Transforming protein RhoA.
    
 0.769
LOC114436382
Rho-related GTP-binding protein RhoA-B.
    
 0.769
LOC114435340
Rho-related GTP-binding protein RhoA-D.
    
 0.769
LOC114438945
Rho-related GTP-binding protein RhoA-D-like.
    
 0.769
RHOB
Ras homolog family member B.
    
 0.769
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.