STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006074annotation not available (297 aa)    
Predicted Functional Partners:
NPAS3
Neuronal PAS domain protein 3.
 
     0.918
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.907
ENSPRNP00000012273
annotation not available
 
      0.899
arnt2
Aryl hydrocarbon receptor nuclear translocator 2.
    
0.886
LOC114449126
Aryl hydrocarbon receptor nuclear translocator-like.
    
0.886
egln3
Egl-9 family hypoxia inducible factor 3.
    
 0.867
LOC114444845
Egl nine homolog 1-like.
    
 0.867
egln1
Egl-9 family hypoxia inducible factor 1.
    
 0.867
eloc
Elongin C.
    
 0.867
ubxn7
UBX domain protein 7.
    
 0.834
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.