STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006151Ferritin, heavy polypeptide 1b. (160 aa)    
Predicted Functional Partners:
ncoa4
Nuclear receptor coactivator 4.
     
 0.842
LOC114451600
Ferritin, middle subunit-like.
  
  
 
0.837
fech
Ferrochelatase.
    
 0.795
gak
Cyclin G associated kinase.
     
 0.660
LOC114433056
Heme oxygenase 2-like.
    
 0.647
hmox1
Heme oxygenase 1.
    
 0.647
LOC114435908
Heme oxygenase-like.
    
 0.647
hmox2
Heme oxygenase 2.
    
 0.647
edil3
EGF like repeats and discoidin domains 3.
   
 
 0.600
LOC114442840
Coagulation factor VIII-like.
   
 
 0.600
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.