STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pidd1P53-induced death domain protein 1. (909 aa)    
Predicted Functional Partners:
casp2
Caspase 2.
    
 0.969
ENSPRNP00000056581
annotation not available
   
 0.916
LOC114447795
Peripheral plasma membrane protein CASK-like.
    
  0.915
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.915
ENSPRNP00000006976
Netrin g1a.
    
 0.894
ENSPRNP00000055352
Vav 3 guanine nucleotide exchange factor b.
    
 0.894
LOC114442728
Elongation factor 1-gamma.
    
 0.883
mars1
methionyl-tRNA synthetase 1.
   
 0.875
ENSPRNP00000004910
annotation not available
   
 0.874
ENSPRNP00000005691
annotation not available
   
  0.872
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.