STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrs1Ribosome biogenesis regulator 1 homolog. (303 aa)    
Predicted Functional Partners:
rpf2
Ribosome production factor 2 homolog.
   
 0.999
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.999
gnl2
G protein nucleolar 2.
   
 0.999
rsl1d1
Ribosomal L1 domain containing 1.
   
  0.999
mrto4
MRT4 homolog, ribosome maturation factor.
   
 0.999
ebna1bp2
EBNA1 binding protein 2.
   
 0.999
gtpbp4
GTP binding protein 4.
   
 0.999
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.998
brix1
Biogenesis of ribosomes BRX1.
   
 0.998
nip7
Nucleolar pre-rRNA processing protein NIP7.
   
 0.998
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.