STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438879Paired box protein Pax-7-like. (514 aa)    
Predicted Functional Partners:
timm9
Translocase of inner mitochondrial membrane 9.
   
 0.894
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.892
timm10
Translocase of inner mitochondrial membrane 10.
   
 0.860
sdhd
Succinate dehydrogenase complex subunit D.
    
 0.801
LOC114450268
Cactin-like.
    
 0.765
sdhc
Succinate dehydrogenase complex subunit C.
    
 0.608
LOC114435842
Nuclear receptor coactivator 3-like.
     
 0.556
LOC114449725
Nuclear receptor coactivator 2-like.
     
 0.556
LOC114438266
Nuclear receptor coactivator 3-like.
     
 0.556
ncoa2
Nuclear receptor coactivator 2.
     
 0.556
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: medium (74%) [HD]