STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006360SAM domain, SH3 domain and nuclear localisation signals 1b. (246 aa)    
Predicted Functional Partners:
LOC114441257
Phosphatidylinositol 3-kinase regulatory subunit alpha-like.
    
  0.643
LOC114434370
Phosphatidylinositol 3-kinase regulatory subunit alpha-like.
    
  0.643
LOC114449893
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
    
  0.643
pik3r1
Phosphoinositide-3-kinase regulatory subunit 1.
    
  0.643
pik3r3
Phosphoinositide-3-kinase regulatory subunit 3.
    
  0.643
LOC114450432
Phosphatidylinositol 3-kinase regulatory subunit gamma-like.
    
  0.643
LOC114444713
Type I inositol 3,4-bisphosphate 4-phosphatase-like.
     
 0.580
inpp4a
Inositol polyphosphate-4-phosphatase type I A.
     
 0.580
inpp4b
Inositol polyphosphate-4-phosphatase type II B.
     
 0.580
synj1
Synaptojanin 1.
     
 0.568
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.