STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrip1Nuclear receptor interacting protein 1. (1211 aa)    
Predicted Functional Partners:
LOC114427457
Estrogen receptor beta-like.
    
 0.897
LOC114428384
Estrogen receptor.
    
 0.897
LOC114428341
Estrogen receptor beta-like.
    
 0.897
ppargc1a
PPARG coactivator 1 alpha.
    
 0.845
LOC114433116
Nuclear receptor ROR-alpha A-like.
    
 0.840
ENSPRNP00000009773
annotation not available
    
 0.840
rora
RAR related orphan receptor A.
    
 0.840
LOC114446183
Steroid hormone receptor ERR1-like.
    
 0.824
NR3C1
Nuclear receptor subfamily 3 group C member 1.
  
 0.813
LOC114433393
Estrogen-related receptor gamma.
    
 0.778
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.