STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEMA4DSemaphorin 4D. (906 aa)    
Predicted Functional Partners:
LOC114436041
plexin-B1-like.
    
0.857
LOC114438013
plexin-B1-like.
    
0.857
LOC114432157
plexin-B2-like.
    
 0.831
plxnb2
Plexin B2.
    
 0.831
ENSPRNP00000044672
annotation not available
    
 0.788
LOC114435954
Macrophage-stimulating protein receptor-like.
    
 0.758
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.758
mst1r
Macrophage stimulating 1 receptor.
    
 0.758
ptprc
Protein tyrosine phosphatase receptor type C.
    
 0.754
LOC114438294
plexin-A2-like.
    
 0.732
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.