STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006519annotation not available (413 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.967
rps27a
Ribosomal protein S27a.
   
 0.962
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.960
LOC114432672
Histone-lysine N-methyltransferase ASH1L-like.
   
 
 0.899
birc6
Baculoviral IAP repeat containing 6.
   
 0.898
ENSPRNP00000056509
annotation not available
   
 
 0.866
phf3
PHD finger protein 3.
   
 
  0.863
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.844
usp9x
Ubiquitin specific peptidase 9 X-linked.
   
 
 0.837
smg1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase.
   
   0.830
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.