STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114437305Protoheme IX farnesyltransferase, mitochondrial. (469 aa)    
Predicted Functional Partners:
LOC114447219
Cytochrome c oxidase assembly protein COX15 homolog.
  
 0.998
LOC114452131
Cytochrome c oxidase assembly protein COX11, mitochondrial.
  
 0.995
LOC114436071
Cytochrome c1, heme protein, mitochondrial.
  
 0.979
LOC114431840
Cytochrome b-c1 complex subunit 7.
   
 
 0.960
LOC114453635
Cytochrome c-type heme lyase.
   
 
 0.952
LOC114445587
Cytochrome c oxidase assembly factor 6 homolog.
    
 0.947
LOC114444207
Cytochrome b-c1 complex subunit 9.
   
 
 0.939
LOC114451948
Cytochrome c oxidase subunit 7A-related protein, mitochondrial.
     
 0.939
LOC114441689
Cytochrome c oxidase subunit 7C, mitochondrial.
     
 0.936
fech
Ferrochelatase.
   
 
 0.931
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.