STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC11443833560S ribosomal protein L22-like. (147 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
rpl14
Ribosomal protein L14.
   
 0.993
LOC114442318
60S ribosomal protein L26.
   
 0.993
rpl38
Ribosomal protein L38.
   
 0.992
rpl11
Ribosomal protein L11.
   
 0.992
rpl15
Ribosomal protein L15.
   
 0.992
rpl31
Ribosomal protein L31.
   
 0.992
rpl27
Ribosomal protein L27.
   
 0.992
RPL32
Ribosomal protein L32.
   
 0.992
rpl4
Ribosomal protein L4.
   
 0.992
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.