STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctifCap binding complex dependent translation initiation factor. (702 aa)    
Predicted Functional Partners:
slbp
Stem-loop binding protein.
    
 0.959
LOC114446713
Uncharacterized LOC114446713.
    
 0.958
LOC114435640
ATP-dependent RNA helicase DDX19A.
    
   0.713
ENSPRNP00000050077
Zgc:193690.
    
   0.713
ENSPRNP00000050081
annotation not available
    
   0.713
NCBP1
Nuclear cap binding protein subunit 1.
      
 0.548
txnl1
Thioredoxin like 1.
      
 0.530
dym
Dymeclin.
      
 0.529
nars1
asparaginyl-tRNA synthetase 1.
      
 0.523
acaa2
acetyl-CoA acyltransferase 2.
      
 0.515
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.