STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebp1Phosphatidylethanolamine binding protein 1. (200 aa)    
Predicted Functional Partners:
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.938
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.937
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.935
dap3
Death associated protein 3.
   
 
 0.930
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.926
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.926
mrps10
Mitochondrial ribosomal protein S10.
   
 
 0.925
mrpl44
Mitochondrial ribosomal protein L44.
  
 
 0.925
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.921
mrpl10
Mitochondrial ribosomal protein L10.
   
 
 0.919
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.