STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfc5Replication factor C subunit 5. (341 aa)    
Predicted Functional Partners:
rad17
RAD17 checkpoint clamp loader component.
   
 0.999
pcna
Proliferating cell nuclear antigen.
  
 0.999
rfc1
Replication factor C subunit 1.
   
 0.999
rfc4
Replication factor C subunit 4.
  
0.999
rfc3
Replication factor C subunit 3.
   
0.999
chtf18
Chromosome transmission fidelity factor 18.
   
 0.998
LOC114439066
Replication factor C subunit 2-like.
  
0.996
LOC114439065
Replication factor C subunit 2-like.
  
0.996
chtf8
Chromosome transmission fidelity factor 8.
   
 0.992
LOC114450878
ATPase family AAA domain-containing protein 5-like.
   
 0.992
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.