STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114443904Dauer larva development regulatory growth factor daf-7-like. (194 aa)    
Predicted Functional Partners:
chrd
Chordin.
    
 0.706
LOC114440241
Noggin-like.
    
 0.667
bmpr1b
Bone morphogenetic protein receptor type 1B.
    
 0.635
LOC114443474
Bone morphogenetic protein receptor type-1B-like.
    
 0.635
ACVR1B
Activin receptor type-1B-like.
    
 0.628
LOC114438307
Activin receptor type-1-like.
    
 0.628
bmpr1a
Bone morphogenetic protein receptor type 1A.
    
 0.628
LOC114452857
TGF-beta receptor type-1-like.
    
 0.628
acvr1
Activin A receptor type 1.
    
 0.628
ACVR1C
Activin A receptor type 1C.
    
 0.628
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.