STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114435525Protein transport protein Sec61 subunit alpha-like 1. (476 aa)    
Predicted Functional Partners:
sec63
SEC63 homolog, protein translocation regulator.
   
 0.999
rps2
Ribosomal protein S2.
  
 0.996
rpl11
Ribosomal protein L11.
  
 
 0.995
rps18
Ribosomal protein S18.
  
 
 0.994
sec61b
SEC61 translocon beta subunit.
   
 0.994
rps11
Ribosomal protein S11.
  
 
 0.994
mrps5
Mitochondrial ribosomal protein S5.
  
 0.994
rps3
Ribosomal protein S3.
  
 
 0.994
rps15
Ribosomal protein S15.
  
 
 0.994
rpl35
Ribosomal protein L35.
  
 
 0.993
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.