STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114431704arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like. (623 aa)    
Predicted Functional Partners:
arfgap1
ADP ribosylation factor GTPase activating protein 1.
     
0.758
LOC114427227
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3-like.
   
0.748
tanc1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1.
    
  0.692
unc5b
Unc-5 netrin receptor B.
    
  0.677
cdkn2c
Cyclin dependent kinase inhibitor 2C.
    
  0.659
cdkn2b
Cyclin dependent kinase inhibitor 2B.
    
  0.659
rapgef2
Rap guanine nucleotide exchange factor 2.
   
  0.653
LOC114445669
arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like.
     
0.646
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
     
0.646
arap2
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2.
     
0.646
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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