STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114433356DNA polymerase epsilon subunit 3-like. (162 aa)    
Predicted Functional Partners:
pole2
DNA polymerase epsilon 2, accessory subunit.
    
 0.992
chrac1
Chromatin accessibility complex subunit 1.
    
 0.992
pole
DNA polymerase epsilon, catalytic subunit.
   
 0.992
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
    
 0.991
baz1a
Bromodomain adjacent to zinc finger domain 1A.
    
 0.990
pole4
DNA polymerase epsilon 4, accessory subunit.
    
 0.987
dr1
Down-regulator of transcription 1.
   
 0.986
nfyc
Nuclear transcription factor Y subunit gamma.
    
 0.978
LOC114434867
C-C motif chemokine 17-like.
    
 0.976
pola1
DNA polymerase alpha 1, catalytic subunit.
   
 0.975
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.