STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114427468Dehydrogenase/reductase SDR family member 13-like. (318 aa)    
Predicted Functional Partners:
LOC114448986
Cytochrome b5 reductase 4.
  
 0.799
oxsm
3-oxoacyl-ACP synthase, mitochondrial.
  
 0.767
mcat
malonyl-CoA-acyl carrier protein transacylase.
  
 0.763
ENSPRNP00000002947
annotation not available
     
 0.752
gart
annotation not available
  
 0.708
FDX1
Ferredoxin 1.
  
 0.705
fdx2
Ferredoxin 2.
  
 0.705
gusb
Glucuronidase beta.
  
 
 0.695
manba
Mannosidase beta.
  
 
 0.695
cd3e
CD3e molecule.
   
  0.676
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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