STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnajc21DnaJ heat shock protein family (Hsp40) member C21. (534 aa)    
Predicted Functional Partners:
LOC114434114
Peroxiredoxin-6-like.
    
  0.857
nmd3
NMD3 ribosome export adaptor.
    
 
 0.857
LOC114449951
Peroxiredoxin-6-like.
    
  0.857
LOC114438164
Proliferation-associated protein 2G4-like.
   
 
 0.813
pa2g4
Proliferation-associated 2G4.
   
 
 0.813
ENSPRNP00000003024
annotation not available
   
 
 0.807
znf622
Zinc finger protein 622.
   
 
 0.807
retreg2
Reticulophagy regulator family member 2.
   
 
 0.756
retreg3
Reticulophagy regulator family member 3.
   
 
 0.756
prdx3
Peroxiredoxin 3.
    
 0.711
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
Server load: low (36%) [HD]