STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006874annotation not available (106 aa)    
Predicted Functional Partners:
hecw1
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1.
 
      0.899
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.888
rps27a
Ribosomal protein S27a.
    
 0.880
polr2a
RNA polymerase II subunit A.
   
 0.852
smad7
SMAD family member 7.
    
 0.822
smad6
SMAD family member 6.
    
 0.822
LOC114433877
Mothers against decapentaplegic homolog 6-like.
    
 0.822
traf6
TNF receptor associated factor 6.
    
 0.815
LOC114448526
26S proteasome non-ATPase regulatory subunit 4.
    
 0.791
LOC114449111
26S proteasome non-ATPase regulatory subunit 4-like.
    
 0.791
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.