STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114448594Transcription factor Sp8. (452 aa)    
Predicted Functional Partners:
ENSPRNP00000027936
annotation not available
    
  0.657
ENSPRNP00000027937
annotation not available
    
  0.657
ENSPRNP00000010757
BRCA1 associated RING domain 1.
    
  0.646
ENSPRNP00000051160
Leucine-rich repeats and guanylate kinase domain containing.
    
  0.620
YTHDC2
YTH domain containing 2.
    
  0.613
sufu
SUFU negative regulator of hedgehog signaling.
    
  0.607
ripk4
Receptor interacting serine/threonine kinase 4.
    
 0.607
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.606
stk36
Serine/threonine kinase 36.
    
  0.595
sgk3
Serum/glucocorticoid regulated kinase family member 3.
    
  0.594
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.