STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114445262B-cell lymphoma/leukemia 11A-like. (740 aa)    
Predicted Functional Partners:
actl6a
Actin like 6A.
   
 0.794
bcl7a
BAF chromatin remodeling complex subunit BCL7A.
   
 
 0.747
LOC114451425
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like.
    
  0.742
bcl7b
BAF chromatin remodeling complex subunit BCL7B.
     
 0.740
ENSPRNP00000046459
annotation not available
    
  0.738
arid2
AT-rich interaction domain 2.
     
 0.736
brd9
Bromodomain containing 9.
     
 0.731
ENSPRNP00000027936
annotation not available
    
  0.657
ENSPRNP00000027937
annotation not available
    
  0.657
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.650
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.