STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC114438951Polyhomeotic-like protein 2. (274 aa)    
Predicted Functional Partners:
LOC114442188
Lysine-specific demethylase 2A-like.
    
 0.787
LOC114440905
Lysine-specific demethylase 2B-like.
    
 0.787
LOC114443547
Lysine-specific demethylase 2B-like.
    
 0.787
kdm2a
Lysine demethylase 2A.
    
 0.787
LOC114440027
F-box/LRR-repeat protein 19-like.
    
 0.787
c9
Complement C9.
   
 0.771
ENSPRNP00000010757
BRCA1 associated RING domain 1.
    
  0.747
RING1
Ring finger protein 1.
    
 0.740
rnf2
Ring finger protein 2.
    
 0.740
cfp
Complement factor properdin.
   
 0.739
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.