STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPRNP00000006984Protein arginine methyltransferase 6. (252 aa)    
Predicted Functional Partners:
rps2
Ribosomal protein S2.
    
 0.892
prmt5
Protein arginine methyltransferase 5.
   
 0.857
fbl
Fibrillarin.
   
 
 0.826
tsr1
TSR1 ribosome maturation factor.
   
  0.807
bysl
Bystin like.
   
 0.801
nhp2
NHP2 ribonucleoprotein.
   
 0.760
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.760
LOC114442737
Multifunctional methyltransferase subunit TRM112-like protein.
   
 0.755
WDR77
WD repeat domain 77.
  
 0.734
noc2l
NOC2 like nucleolar associated transcriptional repressor.
   
   0.733
Your Current Organism:
Parambassis ranga
NCBI taxonomy Id: 210632
Other names: Ambassis ranga, Chanda ranga, Indian glassy fish, P. ranga, Pseudambassis ranga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.